Abscisic Acid Signaling Network

Donated on 4/2/2008

The objective is to determine the set of boolean rules that describe the interactions of the nodes within this plant signaling network. The dataset includes 300 separate boolean pseudodynamic simulations using an asynchronous update scheme.

Dataset Characteristics

Multivariate

Subject Area

Biology

Associated Tasks

Causal-Discovery

Feature Type

Integer

# Instances

300

# Features

43

Dataset Information

Additional Information

The objective is to determine the set of boolean rules that describe the interactions of the nodes within this plant signaling network. The dataset includes 300 separate boolean pseudodynamic simulations of the true rules, using an asynchronous update scheme. Each of the 300 simulations begin with a randomly generated initial condition, in order to ensure sampling of all of the steady states of the system. There are a total of 43 nodes in this dataset, with 5 ndoes being constants. The results for 300 separate simulations are included in the dataset. Each simulation consists of a matrix of 0's and 1's, with 21 rows and 43 columns. The first row is the randomly generated initial condition for the particular simulation, with the next 20 rows being the output from the boolean pseudodynamics simulation. Each of the 43 columns represent the transient response of a particular node. The nodal names are identified at the top of the data file. A line of asterisks is used to separate the simulations from one another. An example set of data is included below: *************************** 1011101110101101101101001010001011000011001 1100001110111101101101111111011001011101011 1100011110111110101101100011010001110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010

Has Missing Values?

No

Variable Information

Each node can have a value of 0 or 1. 38 of the 43 nodes are allowed to vary, with 5 nodes held constant throughout the simulation.

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Creators

Jerry Jenkins

Abhishek Soni

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