An eye on the vine - a dataset for fungi segmentation in microscopic vine wood images
Donated on 3/3/2024
This dataset is intended to help solving the problem of pathogen segmentation in fluorescence microscopy images of vine wood. Because there is no dataset available to cast the problem into a supervised framework, this dataset provides a collection of realistic images based on the knowledge of the image formation model in fluorescence microscopy.
Dataset Characteristics
Image
Subject Area
Biology
Associated Tasks
Classification
Feature Type
Real
# Instances
1308
# Features
-
Dataset Information
Has Missing Values?
No
Introductory Paper
By Munsch, J. and Ouali, S. and Courbot, J.-B. and Pierron, R. and Haeberlé, O.. 2024
Published in Upper-Rhine Artificial Intelligence Symposium 2024, Nov 2024, Offenburg, Germany
Dataset Files
| File | Size |
|---|---|
| An eye on the vine.zip | 156.4 MB |
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pip install ucimlrepo
from ucimlrepo import fetch_ucirepo # fetch dataset an_eye_on_the_vine_a_dataset_for_fungi_segmentation_in_microscopic_vine_wood_images = fetch_ucirepo(id=966) # data (as pandas dataframes) X = an_eye_on_the_vine_a_dataset_for_fungi_segmentation_in_microscopic_vine_wood_images.data.features y = an_eye_on_the_vine_a_dataset_for_fungi_segmentation_in_microscopic_vine_wood_images.data.targets # metadata print(an_eye_on_the_vine_a_dataset_for_fungi_segmentation_in_microscopic_vine_wood_images.metadata) # variable information print(an_eye_on_the_vine_a_dataset_for_fungi_segmentation_in_microscopic_vine_wood_images.variables)
Munsch, J., Ouali, S., Courbot, J., Pierron, R., & Haeberlé, O. (2024). An eye on the vine - a dataset for fungi segmentation in microscopic vine wood images [Dataset]. UCI Machine Learning Repository. https://doi.org/10.24432/C5WK7G.
Keywords
Creators
Julie Munsch
Julie.munsch@eiffage.com
IRIMAS - Université de Haute-Alsace / Eiffage Énergie Systèmes - Clemessy
Sonia Ouali
sonia.ouali@uha.fr
IRIMAS - Université de Haute-Alsace, Mulhouse, France
Jean-Baptiste Courbot
jean-baptiste.courbot@uha.fr
IRIMAS - Université de Haute-Alsace, Mulhouse, France
Romain Pierron
romain.pierron@uha.fr
LVBE - Université de Haute-Alsace
Olivier Haeberlé
olivier.haeberle@uha.fr
IRIMAS - Université de Haute-Alsace, Mulhouse, France
DOI
License
This dataset is licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) license.
This allows for the sharing and adaptation of the datasets for any purpose, provided that the appropriate credit is given.