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Physicochemical Properties of Protein Tertiary Structure Data Set
Download: Data Folder, Data Set Description

Abstract: This is a data set of Physicochemical Properties of Protein Tertiary Structure. The data set is taken from CASP 5-9. There are 45730 decoys and size varying from 0 to 21 armstrong.

Data Set Characteristics:  

Multivariate

Number of Instances:

45730

Area:

Life

Attribute Characteristics:

Real

Number of Attributes:

9

Date Donated

2013-03-31

Associated Tasks:

Regression

Missing Values?

N/A

Number of Web Hits:

70961

Source:

Prashant Singh Rana, psrana '@' gmail.com, ABV - Indian Institute of Information Technology & Management, Gwalior, MP, India.


Data Set Information:

Provide all relevant information about your data set.


Attribute Information:

RMSD-Size of the residue.
F1 - Total surface area.
F2 - Non polar exposed area.
F3 - Fractional area of exposed non polar residue.
F4 - Fractional area of exposed non polar part of residue.
F5 - Molecular mass weighted exposed area.
F6 - Average deviation from standard exposed area of residue.
F7 - Euclidian distance.
F8 - Secondary structure penalty.
F9 - Spacial Distribution constraints (N,K Value).


Relevant Papers:

N/A



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